Download bait group |
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You can download the list of baits in a bait group from eArray in a variety of file formats.
Search or Browse for the bait group that you want to download.
In the Actions
column of the Search Results pane, next to the desired bait group,
click Download.
A list of file types appears in a new window.
Select the desired file type. The list and table below describe the available file types.
TDT – Tab delimited text file that contains the attributes indicated in the table below.
FASTA – FASTA format file that contains the attributes indicated in the table below.
COMPLETE – Tab delimited text file that contains the attributes indicated in the table below.
MINIMAL – Tab delimited text file that contains the attributes indicated in the table below.
BED – Tab delimited text file that contains the attributes indicated in the table below. This file is A BED format track file that you can view in a compatible genome browser.
Attribute |
TDT |
FASTA |
COMPLETE |
MINIMAL |
BED |
BaitID |
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BaitSequence |
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GenomicInterval |
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Species |
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GeneName |
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GeneSymbol |
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Description |
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ControlType |
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Accessions |
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BaitGroups |
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Status |
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ValidationMethod |
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Chromosomal Location |
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CytoBand |
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GoIDs |
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Strand |
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— Attribute included in file format
Note: For the SureSelect RNA Enrichment application type, the Strand attribute is always "+," which indicates that baits are in sense orientation.
Click Download.
If the requested download exceeds 8,000 baits, eArray prepares the
file for download in the background as a separate job. A message tells
you that you will receive an e-mail when the files are ready. Click
Close. You can monitor the
progress of the job in the Pending Jobs pane in the Home tab of your
workspace.
Otherwise, a progress message appears, followed by a File Download
dialog box.
Click Save.
A Save As dialog box appears.
Select a location for the downloaded
file, then click Save.
eArray downloads the file in .zip format.
You can extract the bait list from the .zip archive, and view it with
a word processing or spreadsheet program.
See also